CDS

Accession Number TCMCG073C06885
gbkey CDS
Protein Id XP_010530278.1
Location complement(join(3429027..3430775,3431219..3431296))
Gene LOC104806884
GeneID 104806884
Organism Tarenaya hassleriana

Protein

Length 608aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010531976.1
Definition PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category JKL
Description Pentatricopeptide repeat-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K17710        [VIEW IN KEGG]
ko:K17964        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000959        [VIEW IN EMBL-EBI]
GO:0000963        [VIEW IN EMBL-EBI]
GO:0000966        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004016        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009975        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016849        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080156        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0090615        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:1900864        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGCGATGATGCGGAGGATGGCTTCTGCTTCTACTTCAGGTTTTGTTCATTCTCATCTCTCCTCTTGTCTCTATCTCCGTCCGAGATTCAGCAGTTCTGTCCCTTATAGTAATGTGAAAGATGTTGTTGATGTATTCGACCAAATGGTTCGATCTCGTCCCCTCCCTTCCATCGTTGATTTCAATAAATTACTAAGTGCAATTGCCAAAATGAAACGGTACGATATCGTTATTTCTCTTTGCAAGAGGATGGAATTGCACGGGATTTCACATAGCAACTACAGTTTGAATATTCTTATCAACTGTTTCTGCCGCTCACGTCAAGTGGGTTTGGGATTTTCGGTTTTGGGGAAAATCATAAAAATGGGTTACGAGCCAAATGTTGTCACATTCACCACCCTCATCAATGGATTATGTCTGGAGGGTAAGCTTTCTGCGGCATTAAGCTTAGTTGAACGAATGGTAGAAGATGGATATACTCCTAACGTTGTAACATGTACCACTGTTGTCAACGGACTTTGTCTCCAAGGTAGAATCCGCAAGGCTTTCACTTTAGTTGATCAGATGTCAGAGAAAGGCTATCAACCCAATGTATTCACTTATGGTGCTATTGTGAATGGCATTTGCAAGTTGGGAGATTCCGCTCTAGCTTTAAATTTGATCACCAAGATGGAGGAAAGGCATGTTGAGATCAATGTCGTAGTTTATAATACGATTATAGATTGTCTTTGTAAAGGCGGACTTATAGATGATGCGATTAATCTGTTTAGAAAGATGGATGATCGAGGAGTTACGCCAAATATTGTTACCTACAACACTTTGGTAAATGGTCTTTGTAGTTATGGTAGATGGGGTGATGTCGCACGATCATTGAATGATATGATCAAAAGGAAAATCATCCCTGAAGTTGTCACTTTCACCAGATTAATTGATAATTTTGTTAAAGAGGGAAAGTTTCTAGAAGCCAGTAAACTTTACGAGCAAATGGTTCAGACAGGGTTGGTTCCGAATACTTTCACATATAATTCGTTGATAAAAGGATTTTGCATGCAGAATCGTCTTGATGAGGCGAAAAAAATGTTTGATTTTATGGCAACCAAGGGATGTTCTCCAAACGTGGTGACTTTTAACACTCTCATAGATGGATTTTGCAAGTCCAGTAGGGTCGACGACGGTATGAAACTCTTTAGTGAGATGTCTCAAAGAGGAGTTGTTGCTGATACACATACTTACAACACTCTCATCCAATGGTTTTGTCGAGTAGGCAACCTTGATGCTGCCCGAAAACATTTTCTAGAGACGCAGGGTCATGGTCCTCATCCAGATCTTATCACTTTCAATGTTCTGCTTGATGGACTATGTAAGAATGGAAATTTAGAAAAGGCATTGAGTTTATACAATAAGATGGAAAAGAGTGGGATGAATCTTGATATAATCGCACATACTATAATCATTCATGGCTTGTGTATGGATGACAAGGTTGAGGACGCATTGCGATTGTTTAATGGGCTATTTGATAGAGGGGTGGAGCCAAATGTGAAAACATATACTGCAATGATTTCTGGACTTTGTAGAAAAGGTTTACTTGATGAAGCCGGAAATCTATTTAGAGATATGAAAGAGGCTGGTTGTTTTCCAAATGATCGCACATACAATGCGTTGATTCGGGGTCATCTCATAAATGGATATACATCTATGGGTGTCGAGCTTGTACGCGAAATGCGTAGCTGTGGGTTCTCTGCGGATGCATCAACCACGGAGATTATTGTAGATATGATATATGATGGAGGATTGGATAAGAAATTTGTGGATTCTCGGCCATAG
Protein:  
MSAMMRRMASASTSGFVHSHLSSCLYLRPRFSSSVPYSNVKDVVDVFDQMVRSRPLPSIVDFNKLLSAIAKMKRYDIVISLCKRMELHGISHSNYSLNILINCFCRSRQVGLGFSVLGKIIKMGYEPNVVTFTTLINGLCLEGKLSAALSLVERMVEDGYTPNVVTCTTVVNGLCLQGRIRKAFTLVDQMSEKGYQPNVFTYGAIVNGICKLGDSALALNLITKMEERHVEINVVVYNTIIDCLCKGGLIDDAINLFRKMDDRGVTPNIVTYNTLVNGLCSYGRWGDVARSLNDMIKRKIIPEVVTFTRLIDNFVKEGKFLEASKLYEQMVQTGLVPNTFTYNSLIKGFCMQNRLDEAKKMFDFMATKGCSPNVVTFNTLIDGFCKSSRVDDGMKLFSEMSQRGVVADTHTYNTLIQWFCRVGNLDAARKHFLETQGHGPHPDLITFNVLLDGLCKNGNLEKALSLYNKMEKSGMNLDIIAHTIIIHGLCMDDKVEDALRLFNGLFDRGVEPNVKTYTAMISGLCRKGLLDEAGNLFRDMKEAGCFPNDRTYNALIRGHLINGYTSMGVELVREMRSCGFSADASTTEIIVDMIYDGGLDKKFVDSRP